Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dhx40Q6PE54 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.36■■□□□ 1.01
Dhx40Q6PE54 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Dhx40Q6PE54 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dhx40Q6PE54 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx40Q6PE54 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx40Q6PE54 Rarb-207ENSMUST00000225921 2756 ntBASIC21.33■■□□□ 1
Dhx40Q6PE54 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.33■■□□□ 1
Dhx40Q6PE54 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Dhx40Q6PE54 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Dhx40Q6PE54 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.32■■□□□ 1
Dhx40Q6PE54 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.32■■□□□ 1
Dhx40Q6PE54 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.32■■□□□ 1
Dhx40Q6PE54 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.32■■□□□ 1
Dhx40Q6PE54 Serp2-204ENSMUST00000228055 705 ntBASIC21.32■■□□□ 1
Dhx40Q6PE54 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.32■■□□□ 1
Dhx40Q6PE54 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.32■■□□□ 1
Dhx40Q6PE54 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx40Q6PE54 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.32■■□□□ 1
Dhx40Q6PE54 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dhx40Q6PE54 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx40Q6PE54 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.31■■□□□ 1
Dhx40Q6PE54 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx40Q6PE54 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx40Q6PE54 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Dhx40Q6PE54 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.3■■□□□ 1
Dhx40Q6PE54 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx40Q6PE54 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Dhx40Q6PE54 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Dhx40Q6PE54 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.29■■□□□ 1
Dhx40Q6PE54 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx40Q6PE54 Grk6-206ENSMUST00000224995 2971 ntBASIC21.29■■□□□ 1
Dhx40Q6PE54 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.29■■□□□ 1
Dhx40Q6PE54 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.28■■□□□ 1
Dhx40Q6PE54 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.28■■□□□ 1
Dhx40Q6PE54 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx40Q6PE54 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx40Q6PE54 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx40Q6PE54 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.27■■□□□ 1
Dhx40Q6PE54 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx40Q6PE54 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms