Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp40Q6PE01 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp40Q6PE01 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp40Q6PE01 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Snrnp40Q6PE01 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Snrnp40Q6PE01 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.96■□□□□ 0.3
Snrnp40Q6PE01 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Gm5643-201ENSMUST00000117081 966 ntBASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Snrnp40Q6PE01 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp40Q6PE01 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Gm6576-201ENSMUST00000169678 883 ntBASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp40Q6PE01 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snrnp40Q6PE01 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms