Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf220Q6PDX6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf220Q6PDX6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf220Q6PDX6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf220Q6PDX6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.1■□□□□ 0.49
Rnf220Q6PDX6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf220Q6PDX6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf220Q6PDX6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Gm43566-201ENSMUST00000196851 808 ntBASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf220Q6PDX6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms