Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd3Q6P9Z1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd3Q6P9Z1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd3Q6P9Z1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd3Q6P9Z1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd3Q6P9Z1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcd3Q6P9Z1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Gm14117-201ENSMUST00000122417 843 ntBASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smarcd3Q6P9Z1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarcd3Q6P9Z1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd3Q6P9Z1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarcd3Q6P9Z1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarcd3Q6P9Z1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarcd3Q6P9Z1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms