Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Casc4Q6P2L7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Casc4Q6P2L7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Casc4Q6P2L7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Casc4Q6P2L7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Casc4Q6P2L7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Casc4Q6P2L7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Casc4Q6P2L7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Casc4Q6P2L7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Casc4Q6P2L7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Casc4Q6P2L7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.33■□□□□ 0.69
Casc4Q6P2L7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Casc4Q6P2L7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Casc4Q6P2L7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Gm27801-201ENSMUST00000184174 223 ntBASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Casc4Q6P2L7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms