Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtl3Q6P1Y1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtl3Q6P1Y1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Gm9988-201ENSMUST00000069786 435 ntBASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl3Q6P1Y1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtl3Q6P1Y1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtl3Q6P1Y1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rtl3Q6P1Y1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtl3Q6P1Y1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl3Q6P1Y1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.82■□□□□ 0.76
Rtl3Q6P1Y1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Gm10033-202ENSMUST00000211874 928 ntBASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl3Q6P1Y1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtl3Q6P1Y1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Rtl3Q6P1Y1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl3Q6P1Y1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Gm18671-201ENSMUST00000214826 683 ntBASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl3Q6P1Y1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rtl3Q6P1Y1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rtl3Q6P1Y1 Reep4-203ENSMUST00000226563 1444 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms