Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhga7Q6DD96 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhga7Q6DD96 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga7Q6DD96 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga7Q6DD96 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga7Q6DD96 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Gm9847-201ENSMUST00000052528 599 ntBASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga7Q6DD96 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhga7Q6DD96 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga7Q6DD96 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms