Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Rab3c-203ENSMUST00000224180 967 ntBASIC17.32■□□□□ 0.36
SpenQ62504 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SpenQ62504 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SpenQ62504 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SpenQ62504 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.32■□□□□ 0.36
SpenQ62504 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SpenQ62504 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SpenQ62504 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SpenQ62504 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
SpenQ62504 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SpenQ62504 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SpenQ62504 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SpenQ62504 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.31■□□□□ 0.36
SpenQ62504 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SpenQ62504 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.31■□□□□ 0.36
SpenQ62504 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.31■□□□□ 0.36
SpenQ62504 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SpenQ62504 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
SpenQ62504 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SpenQ62504 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.3■□□□□ 0.36
SpenQ62504 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.3■□□□□ 0.36
SpenQ62504 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SpenQ62504 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SpenQ62504 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SpenQ62504 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.29■□□□□ 0.36
SpenQ62504 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SpenQ62504 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.29■□□□□ 0.36
SpenQ62504 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.29■□□□□ 0.36
SpenQ62504 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
SpenQ62504 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SpenQ62504 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Mir1199-201ENSMUST00000117015 119 ntBASIC17.28■□□□□ 0.36
SpenQ62504 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.28■□□□□ 0.36
SpenQ62504 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SpenQ62504 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SpenQ62504 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SpenQ62504 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SpenQ62504 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.26■□□□□ 0.35
SpenQ62504 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
SpenQ62504 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SpenQ62504 Mir5122-201ENSMUST00000175004 89 ntBASIC17.26■□□□□ 0.35
SpenQ62504 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SpenQ62504 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.26■□□□□ 0.35
SpenQ62504 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SpenQ62504 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.26■□□□□ 0.35
SpenQ62504 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
SpenQ62504 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.25■□□□□ 0.35
SpenQ62504 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SpenQ62504 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SpenQ62504 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.25■□□□□ 0.35
SpenQ62504 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.25■□□□□ 0.35
SpenQ62504 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SpenQ62504 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SpenQ62504 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SpenQ62504 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.24■□□□□ 0.35
SpenQ62504 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SpenQ62504 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.24■□□□□ 0.35
SpenQ62504 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SpenQ62504 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SpenQ62504 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.24■□□□□ 0.35
SpenQ62504 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SpenQ62504 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms