Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.43■□□□□ 0.54
AtmQ62388 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 Gm12896-201ENSMUST00000118430 226 ntBASIC18.43■□□□□ 0.54
AtmQ62388 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 Gm7367-201ENSMUST00000057611 492 ntBASIC18.43■□□□□ 0.54
AtmQ62388 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
AtmQ62388 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.43■□□□□ 0.54
AtmQ62388 Mir1199-201ENSMUST00000117015 119 ntBASIC18.43■□□□□ 0.54
AtmQ62388 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.43■□□□□ 0.54
AtmQ62388 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.42■□□□□ 0.54
AtmQ62388 Gm27741-201ENSMUST00000185060 237 ntBASIC18.42■□□□□ 0.54
AtmQ62388 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.42■□□□□ 0.54
AtmQ62388 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.42■□□□□ 0.54
AtmQ62388 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
AtmQ62388 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AtmQ62388 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
AtmQ62388 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.41■□□□□ 0.54
AtmQ62388 Dio3-201ENSMUST00000097228 1449 ntBASIC18.41■□□□□ 0.54
AtmQ62388 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
AtmQ62388 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
AtmQ62388 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.41■□□□□ 0.54
AtmQ62388 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AtmQ62388 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AtmQ62388 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AtmQ62388 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
AtmQ62388 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AtmQ62388 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
AtmQ62388 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AtmQ62388 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
AtmQ62388 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AtmQ62388 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AtmQ62388 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.39■□□□□ 0.53
AtmQ62388 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.39■□□□□ 0.53
AtmQ62388 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.39■□□□□ 0.53
AtmQ62388 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AtmQ62388 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AtmQ62388 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AtmQ62388 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AtmQ62388 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AtmQ62388 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
AtmQ62388 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AtmQ62388 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AtmQ62388 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.38■□□□□ 0.53
AtmQ62388 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AtmQ62388 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
AtmQ62388 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AtmQ62388 Mir5122-201ENSMUST00000175004 89 ntBASIC18.37■□□□□ 0.53
AtmQ62388 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.37■□□□□ 0.53
AtmQ62388 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AtmQ62388 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
AtmQ62388 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.37■□□□□ 0.53
AtmQ62388 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.37■□□□□ 0.53
AtmQ62388 Gm10698-201ENSMUST00000182663 604 ntBASIC18.36■□□□□ 0.53
AtmQ62388 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AtmQ62388 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.36■□□□□ 0.53
AtmQ62388 Rab3c-203ENSMUST00000224180 967 ntBASIC18.36■□□□□ 0.53
AtmQ62388 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AtmQ62388 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AtmQ62388 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AtmQ62388 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AtmQ62388 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.35■□□□□ 0.53
AtmQ62388 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
AtmQ62388 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.35■□□□□ 0.53
AtmQ62388 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.35■□□□□ 0.53
AtmQ62388 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
AtmQ62388 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
AtmQ62388 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
AtmQ62388 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.35■□□□□ 0.53
AtmQ62388 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.35■□□□□ 0.53
AtmQ62388 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AtmQ62388 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AtmQ62388 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms