Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Notch3Q61982 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.65□□□□□ -0.06
Notch3Q61982 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Notch3Q61982 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Notch3Q61982 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.64□□□□□ -0.07
Notch3Q61982 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.64□□□□□ -0.07
Notch3Q61982 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Notch3Q61982 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Notch3Q61982 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Notch3Q61982 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.63□□□□□ -0.07
Notch3Q61982 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.63□□□□□ -0.07
Notch3Q61982 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Notch3Q61982 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Notch3Q61982 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.62□□□□□ -0.07
Notch3Q61982 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.62□□□□□ -0.07
Notch3Q61982 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.62□□□□□ -0.07
Notch3Q61982 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Notch3Q61982 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Notch3Q61982 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.61□□□□□ -0.07
Notch3Q61982 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Notch3Q61982 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Notch3Q61982 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Notch3Q61982 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Notch3Q61982 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.6□□□□□ -0.07
Notch3Q61982 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.6□□□□□ -0.07
Notch3Q61982 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Notch3Q61982 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Notch3Q61982 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Notch3Q61982 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Notch3Q61982 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Notch3Q61982 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms