Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcd1Q61466 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.06■□□□□ 0.8
Smarcd1Q61466 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Gm13146-201ENSMUST00000118508 780 ntBASIC20.06■□□□□ 0.8
Smarcd1Q61466 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcd1Q61466 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcd1Q61466 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.05■□□□□ 0.8
Smarcd1Q61466 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcd1Q61466 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd1Q61466 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd1Q61466 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smarcd1Q61466 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcd1Q61466 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.04■□□□□ 0.8
Smarcd1Q61466 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.04■□□□□ 0.8
Smarcd1Q61466 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcd1Q61466 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcd1Q61466 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcd1Q61466 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcd1Q61466 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Gm7514-201ENSMUST00000209475 934 ntBASIC20.01■□□□□ 0.79
Smarcd1Q61466 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarcd1Q61466 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Smarcd1Q61466 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smarcd1Q61466 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smarcd1Q61466 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarcd1Q61466 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Gm37179-201ENSMUST00000194862 823 ntBASIC19.98■□□□□ 0.79
Smarcd1Q61466 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarcd1Q61466 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms