Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccna1Q61456 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccna1Q61456 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccna1Q61456 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccna1Q61456 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccna1Q61456 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccna1Q61456 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Ccna1Q61456 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccna1Q61456 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccna1Q61456 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
Ccna1Q61456 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ccna1Q61456 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccna1Q61456 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Ccna1Q61456 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccna1Q61456 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.43■■□□□ 1.02
Ccna1Q61456 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccna1Q61456 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccna1Q61456 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccna1Q61456 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccna1Q61456 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccna1Q61456 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccna1Q61456 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccna1Q61456 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccna1Q61456 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccna1Q61456 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccna1Q61456 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.42■■□□□ 1.02
Ccna1Q61456 Iqck-206ENSMUST00000208658 2891 ntBASIC21.42■■□□□ 1.02
Ccna1Q61456 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccna1Q61456 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccna1Q61456 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ccna1Q61456 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccna1Q61456 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccna1Q61456 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.41■■□□□ 1.02
Ccna1Q61456 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccna1Q61456 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccna1Q61456 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccna1Q61456 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ccna1Q61456 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccna1Q61456 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.4■■□□□ 1.02
Ccna1Q61456 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccna1Q61456 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Ccna1Q61456 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ccna1Q61456 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccna1Q61456 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ccna1Q61456 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.39■■□□□ 1.02
Ccna1Q61456 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Ccna1Q61456 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccna1Q61456 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.39■■□□□ 1.01
Ccna1Q61456 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.39■■□□□ 1.01
Ccna1Q61456 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ccna1Q61456 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccna1Q61456 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccna1Q61456 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ccna1Q61456 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccna1Q61456 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccna1Q61456 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccna1Q61456 Gm7860-201ENSMUST00000121190 879 ntBASIC21.37■■□□□ 1.01
Ccna1Q61456 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccna1Q61456 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Ccna1Q61456 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccna1Q61456 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms