Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.92■□□□□ 0.78
Cldn11Q60771 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cldn11Q60771 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Cldn11Q60771 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn11Q60771 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.91■□□□□ 0.78
Cldn11Q60771 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.91■□□□□ 0.78
Cldn11Q60771 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.91■□□□□ 0.78
Cldn11Q60771 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.91■□□□□ 0.78
Cldn11Q60771 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn11Q60771 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Cldn11Q60771 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Cldn11Q60771 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldn11Q60771 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.89■□□□□ 0.77
Cldn11Q60771 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.89■□□□□ 0.77
Cldn11Q60771 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldn11Q60771 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cldn11Q60771 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Cldn11Q60771 Gm13534-201ENSMUST00000121169 513 ntBASIC19.88■□□□□ 0.77
Cldn11Q60771 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.88■□□□□ 0.77
Cldn11Q60771 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cldn11Q60771 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldn11Q60771 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cldn11Q60771 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cldn11Q60771 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cldn11Q60771 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cldn11Q60771 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.87■□□□□ 0.77
Cldn11Q60771 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cldn11Q60771 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.86■□□□□ 0.77
Cldn11Q60771 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cldn11Q60771 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cldn11Q60771 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn11Q60771 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.85■□□□□ 0.77
Cldn11Q60771 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.85■□□□□ 0.77
Cldn11Q60771 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn11Q60771 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn11Q60771 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn11Q60771 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.84■□□□□ 0.77
Cldn11Q60771 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms