Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctc1Q5SUQ9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctc1Q5SUQ9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ctc1Q5SUQ9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ctc1Q5SUQ9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ctc1Q5SUQ9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ctc1Q5SUQ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ctc1Q5SUQ9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ctc1Q5SUQ9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ctc1Q5SUQ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.3■□□□□ 0.84
Ctc1Q5SUQ9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms