Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav2Q5R1I9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav2Q5R1I9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav2Q5R1I9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav2Q5R1I9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Gm7514-201ENSMUST00000209475 934 ntBASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav2Q5R1I9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav2Q5R1I9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav2Q5R1I9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms