Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm10232-201ENSMUST00000089221 720 ntBASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.91□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm13238-201ENSMUST00000117655 780 ntBASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Gm40881-201ENSMUST00000223397 166 ntBASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15-1-dv6-1Q5R1D2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Rarb-207ENSMUST00000225921 2756 ntBASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav15-1-dv6-1Q5R1D2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms