Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trav3-3Q5R1C3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-3Q5R1C3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav3-3Q5R1C3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm14523-201ENSMUST00000117260 558 ntBASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-3Q5R1C3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-3Q5R1C3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav3-3Q5R1C3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav3-3Q5R1C3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms