Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
Rnf20Q5DTM8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf20Q5DTM8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.81■■□□□ 1.24
Rnf20Q5DTM8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf20Q5DTM8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Rnf20Q5DTM8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf20Q5DTM8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf20Q5DTM8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Gm26833-201ENSMUST00000180899 440 ntBASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
Rnf20Q5DTM8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Iqck-206ENSMUST00000208658 2891 ntBASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Gm43017-201ENSMUST00000198296 752 ntBASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf20Q5DTM8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Gm27801-201ENSMUST00000184174 223 ntBASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf20Q5DTM8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf20Q5DTM8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf20Q5DTM8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf20Q5DTM8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf20Q5DTM8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms