Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Gm6420-201ENSMUST00000193885 723 ntBASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rc3h1Q4VGL6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 Gm10602-201ENSMUST00000098239 609 ntBASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rc3h1Q4VGL6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Rc3h1Q4VGL6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Gm12933-201ENSMUST00000120203 872 ntBASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rc3h1Q4VGL6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Nespas-201ENSMUST00000143738 1083 ntBASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rc3h1Q4VGL6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rc3h1Q4VGL6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rc3h1Q4VGL6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rc3h1Q4VGL6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.23■■□□□ 1.15
Rc3h1Q4VGL6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.23■■□□□ 1.15
Rc3h1Q4VGL6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rc3h1Q4VGL6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rc3h1Q4VGL6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rc3h1Q4VGL6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rc3h1Q4VGL6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rc3h1Q4VGL6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rc3h1Q4VGL6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rc3h1Q4VGL6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms