Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lin28bQ45KJ6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Lin28bQ45KJ6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lin28bQ45KJ6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Lin28bQ45KJ6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Mir5133-201ENSMUST00000174955 77 ntBASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lin28bQ45KJ6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Lin28bQ45KJ6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lin28bQ45KJ6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Gm6420-201ENSMUST00000193885 723 ntBASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lin28bQ45KJ6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.25■□□□□ 0.51
Lin28bQ45KJ6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lin28bQ45KJ6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Nespas-201ENSMUST00000143738 1083 ntBASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lin28bQ45KJ6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Gm6365-201ENSMUST00000054711 744 ntBASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lin28bQ45KJ6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lin28bQ45KJ6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms