Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Naf1Q3UMQ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.54■□□□□ 0.72
Naf1Q3UMQ8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Naf1Q3UMQ8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Naf1Q3UMQ8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.52■□□□□ 0.71
Naf1Q3UMQ8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Naf1Q3UMQ8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Naf1Q3UMQ8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Naf1Q3UMQ8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Naf1Q3UMQ8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Naf1Q3UMQ8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Naf1Q3UMQ8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Naf1Q3UMQ8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.5■□□□□ 0.71
Naf1Q3UMQ8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Naf1Q3UMQ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Naf1Q3UMQ8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Naf1Q3UMQ8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Naf1Q3UMQ8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Naf1Q3UMQ8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Naf1Q3UMQ8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Naf1Q3UMQ8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.45■□□□□ 0.7
Naf1Q3UMQ8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms