Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smcr8Q3UMB5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smcr8Q3UMB5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Smcr8Q3UMB5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smcr8Q3UMB5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smcr8Q3UMB5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smcr8Q3UMB5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Gm12933-201ENSMUST00000120203 872 ntBASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smcr8Q3UMB5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Smcr8Q3UMB5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smcr8Q3UMB5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smcr8Q3UMB5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.58■□□□□ 0.89
Smcr8Q3UMB5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Smcr8Q3UMB5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smcr8Q3UMB5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smcr8Q3UMB5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smcr8Q3UMB5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Smcr8Q3UMB5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smcr8Q3UMB5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms