Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pdlim7Q3TJD7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.77■■□□□ 1.08
Pdlim7Q3TJD7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim7Q3TJD7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim7Q3TJD7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdlim7Q3TJD7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pdlim7Q3TJD7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pdlim7Q3TJD7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pdlim7Q3TJD7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.73■■□□□ 1.07
Pdlim7Q3TJD7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Gm5643-201ENSMUST00000117081 966 ntBASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Gm6576-201ENSMUST00000169678 883 ntBASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pdlim7Q3TJD7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim7Q3TJD7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim7Q3TJD7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim7Q3TJD7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim7Q3TJD7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdlim7Q3TJD7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms