Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Treml4Q3LRV9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Treml4Q3LRV9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Treml4Q3LRV9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Treml4Q3LRV9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.95■□□□□ 0.46
Treml4Q3LRV9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.94■□□□□ 0.46
Treml4Q3LRV9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Treml4Q3LRV9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.93■□□□□ 0.46
Treml4Q3LRV9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Treml4Q3LRV9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Treml4Q3LRV9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.92■□□□□ 0.46
Treml4Q3LRV9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms