Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Sox4Q06831 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox4Q06831 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.87■□□□□ 0.61
Sox4Q06831 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox4Q06831 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox4Q06831 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox4Q06831 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Sox4Q06831 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.86■□□□□ 0.61
Sox4Q06831 Gm38205-201ENSMUST00000192243 258 ntBASIC18.86■□□□□ 0.61
Sox4Q06831 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Gm10033-202ENSMUST00000211874 928 ntBASIC18.86■□□□□ 0.61
Sox4Q06831 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sox4Q06831 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sox4Q06831 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sox4Q06831 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.86■□□□□ 0.61
Sox4Q06831 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox4Q06831 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox4Q06831 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Gm13234-201ENSMUST00000120010 747 ntBASIC18.85■□□□□ 0.61
Sox4Q06831 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.85■□□□□ 0.61
Sox4Q06831 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Sox4Q06831 Gm18671-201ENSMUST00000214826 683 ntBASIC18.85■□□□□ 0.61
Sox4Q06831 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sox4Q06831 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox4Q06831 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox4Q06831 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.84■□□□□ 0.61
Sox4Q06831 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox4Q06831 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.84■□□□□ 0.61
Sox4Q06831 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox4Q06831 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox4Q06831 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Sox4Q06831 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.83■□□□□ 0.61
Sox4Q06831 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox4Q06831 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox4Q06831 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox4Q06831 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox4Q06831 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox4Q06831 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox4Q06831 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox4Q06831 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sox4Q06831 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Sox4Q06831 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sox4Q06831 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox4Q06831 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.81■□□□□ 0.6
Sox4Q06831 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Gm7860-201ENSMUST00000121190 879 ntBASIC18.81■□□□□ 0.6
Sox4Q06831 Gm42569-201ENSMUST00000200539 472 ntBASIC18.81■□□□□ 0.6
Sox4Q06831 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.81■□□□□ 0.6
Sox4Q06831 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox4Q06831 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Sox4Q06831 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms