Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch1Q01705 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch1Q01705 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Notch1Q01705 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.94□□□□□ -0.18
Notch1Q01705 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Notch1Q01705 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Gm9987-201ENSMUST00000069768 567 ntBASIC13.94□□□□□ -0.18
Notch1Q01705 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.94□□□□□ -0.18
Notch1Q01705 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Notch1Q01705 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Notch1Q01705 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.93□□□□□ -0.18
Notch1Q01705 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Notch1Q01705 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Notch1Q01705 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.93□□□□□ -0.18
Notch1Q01705 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.93□□□□□ -0.18
Notch1Q01705 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.93□□□□□ -0.18
Notch1Q01705 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Notch1Q01705 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Notch1Q01705 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.92□□□□□ -0.18
Notch1Q01705 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.92□□□□□ -0.18
Notch1Q01705 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.92□□□□□ -0.18
Notch1Q01705 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.92□□□□□ -0.18
Notch1Q01705 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Notch1Q01705 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Notch1Q01705 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.92□□□□□ -0.18
Notch1Q01705 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Notch1Q01705 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Notch1Q01705 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Notch1Q01705 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.91□□□□□ -0.18
Notch1Q01705 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Notch1Q01705 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Notch1Q01705 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.91□□□□□ -0.18
Notch1Q01705 Mir5122-201ENSMUST00000175004 89 ntBASIC13.91□□□□□ -0.18
Notch1Q01705 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Notch1Q01705 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Notch1Q01705 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Notch1Q01705 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Notch1Q01705 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Notch1Q01705 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Notch1Q01705 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.9□□□□□ -0.18
Notch1Q01705 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.9□□□□□ -0.18
Notch1Q01705 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Notch1Q01705 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.9□□□□□ -0.18
Notch1Q01705 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Notch1Q01705 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.9□□□□□ -0.18
Notch1Q01705 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.89□□□□□ -0.19
Notch1Q01705 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.89□□□□□ -0.19
Notch1Q01705 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Notch1Q01705 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.89□□□□□ -0.19
Notch1Q01705 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Notch1Q01705 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Notch1Q01705 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Notch1Q01705 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.89□□□□□ -0.19
Notch1Q01705 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Notch1Q01705 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Notch1Q01705 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Notch1Q01705 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Notch1Q01705 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Notch1Q01705 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Notch1Q01705 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Notch1Q01705 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Notch1Q01705 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.88□□□□□ -0.19
Notch1Q01705 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms