Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shc1P98083 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shc1P98083 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Shc1P98083 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.26■□□□□ 0.35
Shc1P98083 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.25■□□□□ 0.35
Shc1P98083 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shc1P98083 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Shc1P98083 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shc1P98083 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.25■□□□□ 0.35
Shc1P98083 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.24■□□□□ 0.35
Shc1P98083 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.24■□□□□ 0.35
Shc1P98083 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Shc1P98083 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.24■□□□□ 0.35
Shc1P98083 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shc1P98083 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shc1P98083 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.23■□□□□ 0.35
Shc1P98083 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.23■□□□□ 0.35
Shc1P98083 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.23■□□□□ 0.35
Shc1P98083 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shc1P98083 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.22■□□□□ 0.35
Shc1P98083 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.22■□□□□ 0.35
Shc1P98083 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shc1P98083 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.22■□□□□ 0.35
Shc1P98083 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Shc1P98083 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shc1P98083 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Shc1P98083 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.21■□□□□ 0.35
Shc1P98083 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shc1P98083 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Shc1P98083 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Shc1P98083 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.2■□□□□ 0.34
Shc1P98083 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shc1P98083 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shc1P98083 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.2■□□□□ 0.34
Shc1P98083 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shc1P98083 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.2■□□□□ 0.34
Shc1P98083 Gm18284-201ENSMUST00000172604 624 ntBASIC17.2■□□□□ 0.34
Shc1P98083 Gm10493-201ENSMUST00000097270 612 ntBASIC17.2■□□□□ 0.34
Shc1P98083 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shc1P98083 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.2■□□□□ 0.34
Shc1P98083 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shc1P98083 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Shc1P98083 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Shc1P98083 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Shc1P98083 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Shc1P98083 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.19■□□□□ 0.34
Shc1P98083 Gm5874-201ENSMUST00000096101 508 ntBASIC17.19■□□□□ 0.34
Shc1P98083 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shc1P98083 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.18■□□□□ 0.34
Shc1P98083 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Gm9988-201ENSMUST00000069786 435 ntBASIC17.18■□□□□ 0.34
Shc1P98083 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Shc1P98083 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shc1P98083 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms