Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca2P97929 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca2P97929 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Brca2P97929 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca2P97929 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca2P97929 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Brca2P97929 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.8■□□□□ 0.6
Brca2P97929 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.8■□□□□ 0.6
Brca2P97929 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Brca2P97929 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca2P97929 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Gm37055-201ENSMUST00000191866 133 ntBASIC18.79■□□□□ 0.6
Brca2P97929 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.79■□□□□ 0.6
Brca2P97929 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca2P97929 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.79■□□□□ 0.6
Brca2P97929 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Brca2P97929 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
Brca2P97929 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.78■□□□□ 0.6
Brca2P97929 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.78■□□□□ 0.6
Brca2P97929 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.78■□□□□ 0.6
Brca2P97929 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Brca2P97929 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Brca2P97929 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
Brca2P97929 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Brca2P97929 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Brca2P97929 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca2P97929 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca2P97929 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Brca2P97929 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.76■□□□□ 0.59
Brca2P97929 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.76■□□□□ 0.59
Brca2P97929 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Brca2P97929 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Brca2P97929 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.76■□□□□ 0.59
Brca2P97929 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Brca2P97929 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.76■□□□□ 0.59
Brca2P97929 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Brca2P97929 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Brca2P97929 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Brca2P97929 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Mir6236-201ENSMUST00000184437 123 ntBASIC18.75■□□□□ 0.59
Brca2P97929 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Brca2P97929 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.75■□□□□ 0.59
Brca2P97929 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.75■□□□□ 0.59
Brca2P97929 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Brca2P97929 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.74■□□□□ 0.59
Brca2P97929 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.74■□□□□ 0.59
Brca2P97929 Gm10231-201ENSMUST00000181584 441 ntBASIC18.74■□□□□ 0.59
Brca2P97929 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Gm10175-202ENSMUST00000208752 441 ntBASIC18.74■□□□□ 0.59
Brca2P97929 Gm9987-201ENSMUST00000069768 567 ntBASIC18.74■□□□□ 0.59
Brca2P97929 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Brca2P97929 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Brca2P97929 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Brca2P97929 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Brca2P97929 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms