Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Smn1P97801 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.44■□□□□ 0.22
Smn1P97801 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Smn1P97801 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.44■□□□□ 0.22
Smn1P97801 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Smn1P97801 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smn1P97801 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smn1P97801 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smn1P97801 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Smn1P97801 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smn1P97801 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smn1P97801 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.43■□□□□ 0.22
Smn1P97801 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smn1P97801 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.42■□□□□ 0.22
Smn1P97801 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.42■□□□□ 0.22
Smn1P97801 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smn1P97801 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.42■□□□□ 0.22
Smn1P97801 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Smn1P97801 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smn1P97801 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smn1P97801 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Smn1P97801 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smn1P97801 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smn1P97801 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Smn1P97801 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smn1P97801 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smn1P97801 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smn1P97801 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.4■□□□□ 0.22
Smn1P97801 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.4■□□□□ 0.22
Smn1P97801 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.4■□□□□ 0.22
Smn1P97801 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.4■□□□□ 0.22
Smn1P97801 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smn1P97801 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.22
Smn1P97801 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.39■□□□□ 0.21
Smn1P97801 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.39■□□□□ 0.21
Smn1P97801 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.39■□□□□ 0.21
Smn1P97801 Gm15820-201ENSMUST00000201566 728 ntBASIC16.39■□□□□ 0.21
Smn1P97801 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smn1P97801 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Smn1P97801 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smn1P97801 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.39■□□□□ 0.21
Smn1P97801 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smn1P97801 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smn1P97801 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smn1P97801 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smn1P97801 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smn1P97801 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smn1P97801 BC021767-201ENSMUST00000126387 1716 ntBASIC16.38■□□□□ 0.21
Smn1P97801 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smn1P97801 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smn1P97801 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smn1P97801 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms