Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.07■□□□□ 0.48
Nkx3-2P97503 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.06■□□□□ 0.48
Nkx3-2P97503 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.06■□□□□ 0.48
Nkx3-2P97503 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx3-2P97503 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Gm9988-201ENSMUST00000069786 435 ntBASIC18.05■□□□□ 0.48
Nkx3-2P97503 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Nkx3-2P97503 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx3-2P97503 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx3-2P97503 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.04■□□□□ 0.48
Nkx3-2P97503 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.04■□□□□ 0.48
Nkx3-2P97503 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx3-2P97503 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx3-2P97503 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx3-2P97503 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.02■□□□□ 0.48
Nkx3-2P97503 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.02■□□□□ 0.48
Nkx3-2P97503 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx3-2P97503 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.01■□□□□ 0.47
Nkx3-2P97503 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx3-2P97503 Reep4-203ENSMUST00000226563 1444 ntBASIC18.01■□□□□ 0.47
Nkx3-2P97503 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Nkx3-2P97503 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.01■□□□□ 0.47
Nkx3-2P97503 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.01■□□□□ 0.47
Nkx3-2P97503 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx3-2P97503 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nkx3-2P97503 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18■□□□□ 0.47
Nkx3-2P97503 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nkx3-2P97503 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18■□□□□ 0.47
Nkx3-2P97503 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nkx3-2P97503 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms