Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrkdcP97313 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrkdcP97313 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PrkdcP97313 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
PrkdcP97313 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PrkdcP97313 Gm7889-201ENSMUST00000185591 958 ntBASIC13.41□□□□□ -0.26
PrkdcP97313 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.41□□□□□ -0.26
PrkdcP97313 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
PrkdcP97313 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
PrkdcP97313 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PrkdcP97313 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
PrkdcP97313 Gm18666-201ENSMUST00000190039 958 ntBASIC13.41□□□□□ -0.26
PrkdcP97313 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.41□□□□□ -0.26
PrkdcP97313 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
PrkdcP97313 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.4□□□□□ -0.26
PrkdcP97313 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PrkdcP97313 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.4□□□□□ -0.26
PrkdcP97313 Gm11539-201ENSMUST00000119837 557 ntBASIC13.4□□□□□ -0.26
PrkdcP97313 Gm13436-201ENSMUST00000120418 567 ntBASIC13.4□□□□□ -0.26
PrkdcP97313 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Ank2-226ENSMUST00000189368 339 ntBASIC13.4□□□□□ -0.26
PrkdcP97313 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PrkdcP97313 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PrkdcP97313 Gm9103-201ENSMUST00000119371 405 ntBASIC13.39□□□□□ -0.27
PrkdcP97313 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PrkdcP97313 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.39□□□□□ -0.27
PrkdcP97313 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.39□□□□□ -0.27
PrkdcP97313 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
PrkdcP97313 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Gm21814-202ENSMUST00000203277 873 ntBASIC13.38□□□□□ -0.27
PrkdcP97313 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.38□□□□□ -0.27
PrkdcP97313 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.38□□□□□ -0.27
PrkdcP97313 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.38□□□□□ -0.27
PrkdcP97313 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Gm44549-201ENSMUST00000208351 577 ntBASIC13.38□□□□□ -0.27
PrkdcP97313 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.38□□□□□ -0.27
PrkdcP97313 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PrkdcP97313 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrkdcP97313 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PrkdcP97313 Gm6345-202ENSMUST00000180900 204 ntBASIC13.37□□□□□ -0.27
PrkdcP97313 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
PrkdcP97313 Gm7461-201ENSMUST00000058918 827 ntBASIC13.37□□□□□ -0.27
PrkdcP97313 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC13.37□□□□□ -0.27
PrkdcP97313 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms