Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Trim43cP86449 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim43cP86449 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim43cP86449 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim43cP86449 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim43cP86449 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Trim43cP86449 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Gm43060-201ENSMUST00000200621 289 ntBASIC20.94■□□□□ 0.94
Trim43cP86449 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim43cP86449 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim43cP86449 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim43cP86449 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.93■□□□□ 0.94
Trim43cP86449 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Trim43cP86449 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43cP86449 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim43cP86449 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43cP86449 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.92■□□□□ 0.94
Trim43cP86449 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim43cP86449 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43cP86449 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim43cP86449 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43cP86449 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim43cP86449 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Trim43cP86449 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.91■□□□□ 0.94
Trim43cP86449 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim43cP86449 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim43cP86449 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim43cP86449 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43cP86449 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim43cP86449 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim43cP86449 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim43cP86449 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim43cP86449 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim43cP86449 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.9■□□□□ 0.94
Trim43cP86449 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim43cP86449 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43cP86449 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim43cP86449 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Trim43cP86449 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim43cP86449 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim43cP86449 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Trim43cP86449 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim43cP86449 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim43cP86449 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43cP86449 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.88■□□□□ 0.93
Trim43cP86449 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim43cP86449 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim43cP86449 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim43cP86449 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim43cP86449 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim43cP86449 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43cP86449 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim43cP86449 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms