Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43bP86448 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43bP86448 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim43bP86448 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim43bP86448 Gm43137-201ENSMUST00000198052 594 ntBASIC19.65■□□□□ 0.74
Trim43bP86448 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim43bP86448 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43bP86448 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim43bP86448 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43bP86448 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trim43bP86448 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43bP86448 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trim43bP86448 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43bP86448 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43bP86448 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Trim43bP86448 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim43bP86448 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trim43bP86448 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim43bP86448 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Trim43bP86448 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim43bP86448 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43bP86448 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trim43bP86448 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim43bP86448 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trim43bP86448 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43bP86448 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim43bP86448 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.62■□□□□ 0.73
Trim43bP86448 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Trim43bP86448 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43bP86448 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim43bP86448 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Serp2-204ENSMUST00000228055 705 ntBASIC19.61■□□□□ 0.73
Trim43bP86448 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43bP86448 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trim43bP86448 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43bP86448 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43bP86448 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Trim43bP86448 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43bP86448 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trim43bP86448 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim43bP86448 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43bP86448 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Trim43bP86448 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim43bP86448 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim43bP86448 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim43bP86448 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim43bP86448 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Trim43bP86448 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43bP86448 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43bP86448 Mir7075-201ENSMUST00000184187 82 ntBASIC19.58■□□□□ 0.72
Trim43bP86448 Mir6236-201ENSMUST00000184437 123 ntBASIC19.58■□□□□ 0.72
Trim43bP86448 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43bP86448 Gm6139-201ENSMUST00000079261 882 ntBASIC19.58■□□□□ 0.72
Trim43bP86448 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Trim43bP86448 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms