Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SgcaP82350 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.06■□□□□ 0.16
SgcaP82350 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SgcaP82350 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.06■□□□□ 0.16
SgcaP82350 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.06■□□□□ 0.16
SgcaP82350 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcaP82350 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SgcaP82350 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
SgcaP82350 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.05■□□□□ 0.16
SgcaP82350 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.05■□□□□ 0.16
SgcaP82350 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.05■□□□□ 0.16
SgcaP82350 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SgcaP82350 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SgcaP82350 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcaP82350 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SgcaP82350 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SgcaP82350 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.04■□□□□ 0.16
SgcaP82350 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SgcaP82350 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SgcaP82350 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcaP82350 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SgcaP82350 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcaP82350 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.03■□□□□ 0.16
SgcaP82350 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SgcaP82350 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.03■□□□□ 0.16
SgcaP82350 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcaP82350 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcaP82350 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SgcaP82350 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcaP82350 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcaP82350 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcaP82350 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcaP82350 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SgcaP82350 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcaP82350 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcaP82350 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcaP82350 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SgcaP82350 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcaP82350 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SgcaP82350 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.01■□□□□ 0.15
SgcaP82350 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.01■□□□□ 0.15
SgcaP82350 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.01■□□□□ 0.15
SgcaP82350 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcaP82350 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SgcaP82350 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16■□□□□ 0.15
SgcaP82350 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms