Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smad1P70340 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smad1P70340 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.7■□□□□ 0.74
Smad1P70340 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.7■□□□□ 0.74
Smad1P70340 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.7■□□□□ 0.74
Smad1P70340 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Smad1P70340 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Smad1P70340 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smad1P70340 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad1P70340 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad1P70340 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Smad1P70340 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Smad1P70340 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smad1P70340 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smad1P70340 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Smad1P70340 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.68■□□□□ 0.74
Smad1P70340 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smad1P70340 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Smad1P70340 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smad1P70340 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.67■□□□□ 0.74
Smad1P70340 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smad1P70340 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.67■□□□□ 0.74
Smad1P70340 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Smad1P70340 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.67■□□□□ 0.74
Smad1P70340 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smad1P70340 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smad1P70340 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.66■□□□□ 0.74
Smad1P70340 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smad1P70340 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
Smad1P70340 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smad1P70340 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smad1P70340 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smad1P70340 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Gm27405-201ENSMUST00000184201 112 ntBASIC19.65■□□□□ 0.74
Smad1P70340 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smad1P70340 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Smad1P70340 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smad1P70340 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smad1P70340 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smad1P70340 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.64■□□□□ 0.73
Smad1P70340 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smad1P70340 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.64■□□□□ 0.73
Smad1P70340 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smad1P70340 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad1P70340 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smad1P70340 Gm10493-201ENSMUST00000097270 612 ntBASIC19.63■□□□□ 0.73
Smad1P70340 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smad1P70340 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smad1P70340 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Gm12251-201ENSMUST00000117893 792 ntBASIC19.62■□□□□ 0.73
Smad1P70340 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smad1P70340 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.61■□□□□ 0.73
Smad1P70340 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smad1P70340 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms