Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Traf6P70196 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Traf6P70196 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Traf6P70196 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.82■□□□□ 0.6
Traf6P70196 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Traf6P70196 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.82■□□□□ 0.6
Traf6P70196 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.82■□□□□ 0.6
Traf6P70196 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Traf6P70196 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Traf6P70196 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf6P70196 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Traf6P70196 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf6P70196 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Traf6P70196 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
Traf6P70196 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Serp2-204ENSMUST00000228055 705 ntBASIC18.8■□□□□ 0.6
Traf6P70196 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.8■□□□□ 0.6
Traf6P70196 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.8■□□□□ 0.6
Traf6P70196 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Traf6P70196 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Traf6P70196 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.79■□□□□ 0.6
Traf6P70196 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.79■□□□□ 0.6
Traf6P70196 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.79■□□□□ 0.6
Traf6P70196 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Traf6P70196 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Traf6P70196 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Traf6P70196 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.78■□□□□ 0.6
Traf6P70196 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.78■□□□□ 0.6
Traf6P70196 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.78■□□□□ 0.6
Traf6P70196 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.78■□□□□ 0.6
Traf6P70196 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Traf6P70196 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Traf6P70196 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.77■□□□□ 0.6
Traf6P70196 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Traf6P70196 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Traf6P70196 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Traf6P70196 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.77■□□□□ 0.59
Traf6P70196 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Traf6P70196 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.76■□□□□ 0.59
Traf6P70196 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Traf6P70196 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
Traf6P70196 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Traf6P70196 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.76■□□□□ 0.59
Traf6P70196 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.76■□□□□ 0.59
Traf6P70196 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.76■□□□□ 0.59
Traf6P70196 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Traf6P70196 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Traf6P70196 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms