Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm6P62313 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm6P62313 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.8■□□□□ 0.28
Lsm6P62313 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsm6P62313 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsm6P62313 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm6P62313 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm6P62313 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm6P62313 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsm6P62313 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lsm6P62313 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm6P62313 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm6P62313 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lsm6P62313 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm6P62313 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Lsm6P62313 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lsm6P62313 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lsm6P62313 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm6P62313 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Lsm6P62313 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm6P62313 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm6P62313 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.78■□□□□ 0.28
Lsm6P62313 Gm27801-201ENSMUST00000184174 223 ntBASIC16.78■□□□□ 0.28
Lsm6P62313 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lsm6P62313 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm6P62313 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm6P62313 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lsm6P62313 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.77■□□□□ 0.28
Lsm6P62313 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.77■□□□□ 0.28
Lsm6P62313 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsm6P62313 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm6P62313 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm6P62313 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm6P62313 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.77■□□□□ 0.27
Lsm6P62313 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm6P62313 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm6P62313 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.76■□□□□ 0.27
Lsm6P62313 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Lsm6P62313 Gm26833-201ENSMUST00000180899 440 ntBASIC16.76■□□□□ 0.27
Lsm6P62313 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lsm6P62313 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lsm6P62313 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm6P62313 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsm6P62313 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm6P62313 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsm6P62313 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsm6P62313 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lsm6P62313 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm6P62313 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm6P62313 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.75■□□□□ 0.27
Lsm6P62313 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm6P62313 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm6P62313 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm6P62313 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.74■□□□□ 0.27
Lsm6P62313 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lsm6P62313 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lsm6P62313 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm6P62313 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms