Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.69□□□□□ -0.22
Ube2d3P61079 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.69□□□□□ -0.22
Ube2d3P61079 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.69□□□□□ -0.22
Ube2d3P61079 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube2d3P61079 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ube2d3P61079 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube2d3P61079 AA386476-201ENSMUST00000098781 1665 ntBASIC13.69□□□□□ -0.22
Ube2d3P61079 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube2d3P61079 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Ube2d3P61079 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
Ube2d3P61079 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ube2d3P61079 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.68□□□□□ -0.22
Ube2d3P61079 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ube2d3P61079 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.67□□□□□ -0.22
Ube2d3P61079 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.67□□□□□ -0.22
Ube2d3P61079 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ube2d3P61079 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ube2d3P61079 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Ube2d3P61079 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Grk6-206ENSMUST00000224995 2971 ntBASIC13.66□□□□□ -0.22
Ube2d3P61079 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.66□□□□□ -0.22
Ube2d3P61079 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ube2d3P61079 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ube2d3P61079 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ube2d3P61079 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.65□□□□□ -0.22
Ube2d3P61079 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.65□□□□□ -0.22
Ube2d3P61079 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.65□□□□□ -0.22
Ube2d3P61079 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ube2d3P61079 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.64□□□□□ -0.23
Ube2d3P61079 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ube2d3P61079 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.64□□□□□ -0.23
Ube2d3P61079 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.64□□□□□ -0.23
Ube2d3P61079 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ube2d3P61079 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ube2d3P61079 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ube2d3P61079 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ube2d3P61079 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms