Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.48■□□□□ 0.87
NrlP54846 Gm38205-201ENSMUST00000192243 258 ntBASIC20.48■□□□□ 0.87
NrlP54846 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NrlP54846 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.47■□□□□ 0.87
NrlP54846 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.47■□□□□ 0.87
NrlP54846 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NrlP54846 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NrlP54846 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NrlP54846 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NrlP54846 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.46■□□□□ 0.87
NrlP54846 Gm20760-201ENSMUST00000179197 648 ntBASIC20.46■□□□□ 0.87
NrlP54846 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Gm6365-201ENSMUST00000054711 744 ntBASIC20.46■□□□□ 0.87
NrlP54846 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NrlP54846 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NrlP54846 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NrlP54846 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NrlP54846 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NrlP54846 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NrlP54846 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Gm13148-201ENSMUST00000118892 745 ntBASIC20.45■□□□□ 0.86
NrlP54846 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.45■□□□□ 0.86
NrlP54846 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NrlP54846 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NrlP54846 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NrlP54846 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NrlP54846 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
NrlP54846 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NrlP54846 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NrlP54846 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NrlP54846 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.43■□□□□ 0.86
NrlP54846 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NrlP54846 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NrlP54846 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.43■□□□□ 0.86
NrlP54846 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NrlP54846 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NrlP54846 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NrlP54846 Gm12527-201ENSMUST00000117967 564 ntBASIC20.42■□□□□ 0.86
NrlP54846 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.42■□□□□ 0.86
NrlP54846 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NrlP54846 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NrlP54846 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.42■□□□□ 0.86
NrlP54846 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.42■□□□□ 0.86
NrlP54846 Gm6420-201ENSMUST00000193885 723 ntBASIC20.42■□□□□ 0.86
NrlP54846 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
NrlP54846 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NrlP54846 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NrlP54846 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.42■□□□□ 0.86
NrlP54846 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NrlP54846 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NrlP54846 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.41■□□□□ 0.86
NrlP54846 Gm5408-201ENSMUST00000197998 747 ntBASIC20.41■□□□□ 0.86
NrlP54846 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.41■□□□□ 0.86
NrlP54846 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NrlP54846 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.41■□□□□ 0.86
NrlP54846 Gm13534-201ENSMUST00000121169 513 ntBASIC20.4■□□□□ 0.86
NrlP54846 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.4■□□□□ 0.86
NrlP54846 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NrlP54846 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.4■□□□□ 0.86
NrlP54846 Gm22240-201ENSMUST00000175225 82 ntBASIC20.4■□□□□ 0.86
NrlP54846 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NrlP54846 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NrlP54846 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NrlP54846 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms