Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nub1P54729 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nub1P54729 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nub1P54729 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nub1P54729 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Nub1P54729 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
Nub1P54729 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.63■□□□□ 0.89
Nub1P54729 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.63■□□□□ 0.89
Nub1P54729 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
Nub1P54729 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.63■□□□□ 0.89
Nub1P54729 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nub1P54729 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.62■□□□□ 0.89
Nub1P54729 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.62■□□□□ 0.89
Nub1P54729 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nub1P54729 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.61■□□□□ 0.89
Nub1P54729 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Gm27801-201ENSMUST00000184174 223 ntBASIC20.61■□□□□ 0.89
Nub1P54729 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nub1P54729 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
Nub1P54729 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.6■□□□□ 0.89
Nub1P54729 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Nub1P54729 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nub1P54729 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nub1P54729 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nub1P54729 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nub1P54729 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Nub1P54729 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nub1P54729 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nub1P54729 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.59■□□□□ 0.89
Nub1P54729 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nub1P54729 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nub1P54729 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nub1P54729 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nub1P54729 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nub1P54729 Gm15039-201ENSMUST00000118914 875 ntBASIC20.58■□□□□ 0.89
Nub1P54729 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.57■□□□□ 0.88
Nub1P54729 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Nub1P54729 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nub1P54729 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.57■□□□□ 0.88
Nub1P54729 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.57■□□□□ 0.88
Nub1P54729 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.57■□□□□ 0.88
Nub1P54729 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nub1P54729 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.57■□□□□ 0.88
Nub1P54729 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nub1P54729 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nub1P54729 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nub1P54729 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Nub1P54729 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.56■□□□□ 0.88
Nub1P54729 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nub1P54729 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nub1P54729 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nub1P54729 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nub1P54729 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nub1P54729 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nub1P54729 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.55■□□□□ 0.88
Nub1P54729 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nub1P54729 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Nub1P54729 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms