Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Msh6P54276 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Msh6P54276 Gm37856-201ENSMUST00000191634 999 ntBASIC24.61■■□□□ 1.53
Msh6P54276 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.61■■□□□ 1.53
Msh6P54276 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Msh6P54276 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Msh6P54276 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Msh6P54276 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Msh6P54276 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Msh6P54276 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.6■■□□□ 1.53
Msh6P54276 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.6■■□□□ 1.53
Msh6P54276 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Msh6P54276 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Msh6P54276 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Msh6P54276 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Msh6P54276 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Msh6P54276 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Msh6P54276 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Msh6P54276 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Msh6P54276 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Msh6P54276 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Msh6P54276 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Msh6P54276 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Msh6P54276 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.58■■□□□ 1.53
Msh6P54276 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Msh6P54276 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Msh6P54276 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Msh6P54276 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Msh6P54276 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Msh6P54276 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC24.57■■□□□ 1.52
Msh6P54276 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Msh6P54276 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Msh6P54276 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Msh6P54276 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Msh6P54276 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.56■■□□□ 1.52
Msh6P54276 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Msh6P54276 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.56■■□□□ 1.52
Msh6P54276 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Msh6P54276 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Msh6P54276 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Msh6P54276 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.55■■□□□ 1.52
Msh6P54276 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 Gm26524-201ENSMUST00000192339 390 ntBASIC24.55■■□□□ 1.52
Msh6P54276 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Msh6P54276 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Msh6P54276 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Msh6P54276 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC24.55■■□□□ 1.52
Msh6P54276 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
Msh6P54276 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC24.55■■□□□ 1.52
Msh6P54276 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Msh6P54276 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Msh6P54276 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Msh6P54276 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
Msh6P54276 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.54■■□□□ 1.52
Msh6P54276 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC24.54■■□□□ 1.52
Msh6P54276 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.54■■□□□ 1.52
Msh6P54276 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Msh6P54276 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Msh6P54276 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Msh6P54276 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Msh6P54276 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Msh6P54276 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.53■■□□□ 1.52
Msh6P54276 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC24.53■■□□□ 1.52
Msh6P54276 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Msh6P54276 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC24.53■■□□□ 1.52
Msh6P54276 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Msh6P54276 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
Msh6P54276 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Msh6P54276 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC24.52■■□□□ 1.52
Msh6P54276 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Msh6P54276 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.51■■□□□ 1.51
Msh6P54276 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Msh6P54276 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Msh6P54276 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Msh6P54276 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.51■■□□□ 1.51
Msh6P54276 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Msh6P54276 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Msh6P54276 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Msh6P54276 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Msh6P54276 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Msh6P54276 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.5■■□□□ 1.51
Msh6P54276 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms