Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atxn1P54254 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.03■□□□□ 0.64
Atxn1P54254 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.03■□□□□ 0.64
Atxn1P54254 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.03■□□□□ 0.64
Atxn1P54254 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.03■□□□□ 0.64
Atxn1P54254 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Atxn1P54254 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.03■□□□□ 0.64
Atxn1P54254 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atxn1P54254 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Atxn1P54254 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.02■□□□□ 0.64
Atxn1P54254 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Atxn1P54254 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.02■□□□□ 0.64
Atxn1P54254 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.02■□□□□ 0.64
Atxn1P54254 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Atxn1P54254 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Atxn1P54254 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atxn1P54254 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atxn1P54254 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atxn1P54254 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atxn1P54254 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Atxn1P54254 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atxn1P54254 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atxn1P54254 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.01■□□□□ 0.63
Atxn1P54254 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Atxn1P54254 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atxn1P54254 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atxn1P54254 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atxn1P54254 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Atxn1P54254 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Atxn1P54254 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19■□□□□ 0.63
Atxn1P54254 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Atxn1P54254 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19■□□□□ 0.63
Atxn1P54254 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Atxn1P54254 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19■□□□□ 0.63
Atxn1P54254 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Atxn1P54254 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Atxn1P54254 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Atxn1P54254 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.99■□□□□ 0.63
Atxn1P54254 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atxn1P54254 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atxn1P54254 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Atxn1P54254 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atxn1P54254 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Atxn1P54254 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atxn1P54254 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.98■□□□□ 0.63
Atxn1P54254 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atxn1P54254 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atxn1P54254 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Atxn1P54254 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Atxn1P54254 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Atxn1P54254 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.97■□□□□ 0.63
Atxn1P54254 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Atxn1P54254 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.97■□□□□ 0.63
Atxn1P54254 Gm6211-202ENSMUST00000167849 925 ntBASIC18.97■□□□□ 0.63
Atxn1P54254 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.97■□□□□ 0.63
Atxn1P54254 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Atxn1P54254 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Atxn1P54254 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atxn1P54254 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms