Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Lhx4P53776 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx4P53776 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx4P53776 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lhx4P53776 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.19■□□□□ 0.18
Lhx4P53776 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx4P53776 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx4P53776 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lhx4P53776 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Lhx4P53776 Gm43173-201ENSMUST00000202246 593 ntBASIC16.19■□□□□ 0.18
Lhx4P53776 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.19■□□□□ 0.18
Lhx4P53776 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx4P53776 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx4P53776 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Lhx4P53776 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lhx4P53776 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lhx4P53776 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lhx4P53776 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.18■□□□□ 0.18
Lhx4P53776 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lhx4P53776 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lhx4P53776 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx4P53776 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx4P53776 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx4P53776 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.17■□□□□ 0.18
Lhx4P53776 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.17■□□□□ 0.18
Lhx4P53776 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx4P53776 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lhx4P53776 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx4P53776 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Lhx4P53776 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Lhx4P53776 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Lhx4P53776 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.16■□□□□ 0.18
Lhx4P53776 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.16■□□□□ 0.18
Lhx4P53776 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.16■□□□□ 0.18
Lhx4P53776 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx4P53776 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.15■□□□□ 0.18
Lhx4P53776 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.15■□□□□ 0.18
Lhx4P53776 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.15■□□□□ 0.18
Lhx4P53776 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.15■□□□□ 0.18
Lhx4P53776 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx4P53776 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx4P53776 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Lhx4P53776 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Lhx4P53776 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.14■□□□□ 0.17
Lhx4P53776 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.14■□□□□ 0.17
Lhx4P53776 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.14■□□□□ 0.17
Lhx4P53776 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lhx4P53776 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx4P53776 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx4P53776 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Lhx4P53776 Gm26833-201ENSMUST00000180899 440 ntBASIC16.13■□□□□ 0.17
Lhx4P53776 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx4P53776 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx4P53776 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Lhx4P53776 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Lhx4P53776 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lhx4P53776 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms