Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lbx1P52955 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.68■□□□□ 0.58
Lbx1P52955 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.68■□□□□ 0.58
Lbx1P52955 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lbx1P52955 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lbx1P52955 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.68■□□□□ 0.58
Lbx1P52955 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lbx1P52955 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lbx1P52955 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lbx1P52955 Gm6345-202ENSMUST00000180900 204 ntBASIC18.67■□□□□ 0.58
Lbx1P52955 Gm17971-201ENSMUST00000190239 806 ntBASIC18.67■□□□□ 0.58
Lbx1P52955 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lbx1P52955 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lbx1P52955 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
Lbx1P52955 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lbx1P52955 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.66■□□□□ 0.58
Lbx1P52955 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lbx1P52955 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lbx1P52955 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lbx1P52955 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.65■□□□□ 0.58
Lbx1P52955 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lbx1P52955 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
Lbx1P52955 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lbx1P52955 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lbx1P52955 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lbx1P52955 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lbx1P52955 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Gm10013-201ENSMUST00000106074 672 ntBASIC18.63■□□□□ 0.57
Lbx1P52955 AA414768-201ENSMUST00000121924 1257 ntBASIC18.63■□□□□ 0.57
Lbx1P52955 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.63■□□□□ 0.57
Lbx1P52955 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lbx1P52955 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Gm2399-201ENSMUST00000104944 225 ntBASIC18.62■□□□□ 0.57
Lbx1P52955 Gm13559-201ENSMUST00000120476 863 ntBASIC18.62■□□□□ 0.57
Lbx1P52955 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.62■□□□□ 0.57
Lbx1P52955 Gm7889-201ENSMUST00000185591 958 ntBASIC18.62■□□□□ 0.57
Lbx1P52955 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.62■□□□□ 0.57
Lbx1P52955 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lbx1P52955 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lbx1P52955 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Lbx1P52955 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Lbx1P52955 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.61■□□□□ 0.57
Lbx1P52955 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lbx1P52955 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lbx1P52955 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lbx1P52955 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.6■□□□□ 0.57
Lbx1P52955 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lbx1P52955 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.6■□□□□ 0.57
Lbx1P52955 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Lbx1P52955 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.6■□□□□ 0.57
Lbx1P52955 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lbx1P52955 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lbx1P52955 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lbx1P52955 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.59■□□□□ 0.57
Lbx1P52955 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lbx1P52955 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lbx1P52955 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lbx1P52955 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lbx1P52955 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.58■□□□□ 0.56
Lbx1P52955 Gm13158-201ENSMUST00000122007 736 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms