Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1P51675 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccr1P51675 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.95■□□□□ 0.94
Ccr1P51675 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
Ccr1P51675 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccr1P51675 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ccr1P51675 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccr1P51675 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ccr1P51675 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1P51675 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccr1P51675 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.94■□□□□ 0.94
Ccr1P51675 Gm6365-201ENSMUST00000054711 744 ntBASIC20.94■□□□□ 0.94
Ccr1P51675 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.94■□□□□ 0.94
Ccr1P51675 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1P51675 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccr1P51675 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccr1P51675 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccr1P51675 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.93■□□□□ 0.94
Ccr1P51675 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccr1P51675 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccr1P51675 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.93■□□□□ 0.94
Ccr1P51675 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.93■□□□□ 0.94
Ccr1P51675 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ccr1P51675 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ccr1P51675 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1P51675 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Ccr1P51675 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr1P51675 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr1P51675 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr1P51675 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr1P51675 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccr1P51675 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1P51675 Gm7290-201ENSMUST00000104990 617 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Gm12918-201ENSMUST00000120234 636 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Gm15710-201ENSMUST00000121821 636 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccr1P51675 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Gm5075-201ENSMUST00000196916 622 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1P51675 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccr1P51675 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1P51675 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1P51675 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.91■□□□□ 0.94
Ccr1P51675 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1P51675 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr1P51675 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccr1P51675 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr1P51675 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr1P51675 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccr1P51675 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccr1P51675 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccr1P51675 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ccr1P51675 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
Ccr1P51675 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr1P51675 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ccr1P51675 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Ccr1P51675 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccr1P51675 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Ccr1P51675 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccr1P51675 Gm27011-201ENSMUST00000182352 972 ntBASIC20.89■□□□□ 0.93
Ccr1P51675 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccr1P51675 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.89■□□□□ 0.93
Ccr1P51675 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr1P51675 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr1P51675 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1P51675 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1P51675 Gm13148-201ENSMUST00000118892 745 ntBASIC20.88■□□□□ 0.93
Ccr1P51675 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1P51675 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1P51675 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1P51675 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms