Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1aP50516 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1aP50516 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Atp6v1aP50516 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1aP50516 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.18■■□□□ 1.3
Atp6v1aP50516 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Atp6v1aP50516 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp6v1aP50516 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Atp6v1aP50516 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.16■■□□□ 1.3
Atp6v1aP50516 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1aP50516 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Atp6v1aP50516 Mir6982-201ENSMUST00000184354 68 ntBASIC23.15■■□□□ 1.3
Atp6v1aP50516 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Atp6v1aP50516 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Atp6v1aP50516 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Atp6v1aP50516 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Gm27275-201ENSMUST00000184318 272 ntBASIC23.13■■□□□ 1.29
Atp6v1aP50516 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.13■■□□□ 1.29
Atp6v1aP50516 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1aP50516 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atp6v1aP50516 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.11■■□□□ 1.29
Atp6v1aP50516 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1aP50516 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.1■■□□□ 1.29
Atp6v1aP50516 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1aP50516 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Atp6v1aP50516 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1aP50516 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1aP50516 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1aP50516 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Gm22325-201ENSMUST00000158904 308 ntBASIC23.09■■□□□ 1.29
Atp6v1aP50516 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Atp6v1aP50516 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Atp6v1aP50516 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.08■■□□□ 1.29
Atp6v1aP50516 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Atp6v1aP50516 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.08■■□□□ 1.29
Atp6v1aP50516 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Atp6v1aP50516 Gm12896-201ENSMUST00000118430 226 ntBASIC23.08■■□□□ 1.29
Atp6v1aP50516 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.08■■□□□ 1.29
Atp6v1aP50516 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms