Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt6aP50446 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt6aP50446 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt6aP50446 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.03■□□□□ 0.64
Krt6aP50446 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt6aP50446 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt6aP50446 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Krt6aP50446 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Krt6aP50446 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.02■□□□□ 0.64
Krt6aP50446 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
Krt6aP50446 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.02■□□□□ 0.64
Krt6aP50446 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Krt6aP50446 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt6aP50446 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Krt6aP50446 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Krt6aP50446 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt6aP50446 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.01■□□□□ 0.63
Krt6aP50446 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.01■□□□□ 0.63
Krt6aP50446 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Krt6aP50446 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Krt6aP50446 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt6aP50446 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19■□□□□ 0.63
Krt6aP50446 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19■□□□□ 0.63
Krt6aP50446 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19■□□□□ 0.63
Krt6aP50446 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Krt6aP50446 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Krt6aP50446 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt6aP50446 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt6aP50446 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.99■□□□□ 0.63
Krt6aP50446 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.99■□□□□ 0.63
Krt6aP50446 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Krt6aP50446 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt6aP50446 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Krt6aP50446 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Krt6aP50446 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt6aP50446 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt6aP50446 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 BC021767-201ENSMUST00000126387 1716 ntBASIC18.98■□□□□ 0.63
Krt6aP50446 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Gm45102-201ENSMUST00000207427 857 ntBASIC18.98■□□□□ 0.63
Krt6aP50446 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.98■□□□□ 0.63
Krt6aP50446 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.98■□□□□ 0.63
Krt6aP50446 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Krt6aP50446 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Krt6aP50446 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Krt6aP50446 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt6aP50446 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.97■□□□□ 0.63
Krt6aP50446 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.97■□□□□ 0.63
Krt6aP50446 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt6aP50446 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Krt6aP50446 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Gm14117-201ENSMUST00000122417 843 ntBASIC18.96■□□□□ 0.63
Krt6aP50446 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt6aP50446 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.96■□□□□ 0.63
Krt6aP50446 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt6aP50446 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt6aP50446 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Krt6aP50446 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt6aP50446 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt6aP50446 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt6aP50446 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms