Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx3P48381 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Rfx3P48381 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.29■□□□□ 0.36
Rfx3P48381 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Rfx3P48381 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx3P48381 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.29■□□□□ 0.36
Rfx3P48381 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx3P48381 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfx3P48381 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.28■□□□□ 0.36
Rfx3P48381 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfx3P48381 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.28■□□□□ 0.36
Rfx3P48381 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.28■□□□□ 0.36
Rfx3P48381 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfx3P48381 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx3P48381 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rfx3P48381 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx3P48381 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rfx3P48381 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx3P48381 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx3P48381 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfx3P48381 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx3P48381 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx3P48381 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx3P48381 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rfx3P48381 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Rfx3P48381 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx3P48381 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.25■□□□□ 0.35
Rfx3P48381 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
Rfx3P48381 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfx3P48381 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rfx3P48381 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx3P48381 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfx3P48381 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.24■□□□□ 0.35
Rfx3P48381 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfx3P48381 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.24■□□□□ 0.35
Rfx3P48381 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx3P48381 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx3P48381 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Rfx3P48381 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx3P48381 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx3P48381 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx3P48381 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Rfx3P48381 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx3P48381 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx3P48381 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx3P48381 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx3P48381 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx3P48381 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx3P48381 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfx3P48381 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx3P48381 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx3P48381 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfx3P48381 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rfx3P48381 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx3P48381 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx3P48381 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.22■□□□□ 0.35
Rfx3P48381 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx3P48381 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx3P48381 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Rfx3P48381 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx3P48381 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx3P48381 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms