Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 AA386476-201ENSMUST00000098781 1665 ntBASIC18.17■□□□□ 0.5
Nkx2-6P43688 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-6P43688 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-6P43688 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Gm13534-201ENSMUST00000121169 513 ntBASIC18.15■□□□□ 0.5
Nkx2-6P43688 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-6P43688 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx2-6P43688 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.14■□□□□ 0.49
Nkx2-6P43688 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-6P43688 Gm12441-201ENSMUST00000121806 588 ntBASIC18.14■□□□□ 0.49
Nkx2-6P43688 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.14■□□□□ 0.49
Nkx2-6P43688 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-6P43688 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-6P43688 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-6P43688 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nkx2-6P43688 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-6P43688 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx2-6P43688 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.12■□□□□ 0.49
Nkx2-6P43688 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx2-6P43688 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Gm38205-201ENSMUST00000192243 258 ntBASIC18.11■□□□□ 0.49
Nkx2-6P43688 Gm4968-201ENSMUST00000071458 858 ntBASIC18.11■□□□□ 0.49
Nkx2-6P43688 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx2-6P43688 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx2-6P43688 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms