Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox18P43680 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.41■□□□□ 0.54
Sox18P43680 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox18P43680 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox18P43680 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox18P43680 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox18P43680 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox18P43680 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Sox18P43680 Gm11643-201ENSMUST00000119578 864 ntBASIC18.4■□□□□ 0.54
Sox18P43680 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.4■□□□□ 0.54
Sox18P43680 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sox18P43680 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox18P43680 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.39■□□□□ 0.54
Sox18P43680 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Sox18P43680 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox18P43680 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox18P43680 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Sox18P43680 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox18P43680 Gm5643-201ENSMUST00000117081 966 ntBASIC18.39■□□□□ 0.53
Sox18P43680 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox18P43680 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox18P43680 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox18P43680 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox18P43680 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox18P43680 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.38■□□□□ 0.53
Sox18P43680 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.38■□□□□ 0.53
Sox18P43680 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.38■□□□□ 0.53
Sox18P43680 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sox18P43680 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox18P43680 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox18P43680 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.37■□□□□ 0.53
Sox18P43680 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox18P43680 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox18P43680 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox18P43680 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sox18P43680 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox18P43680 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox18P43680 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sox18P43680 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox18P43680 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox18P43680 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox18P43680 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sox18P43680 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox18P43680 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.35■□□□□ 0.53
Sox18P43680 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.35■□□□□ 0.53
Sox18P43680 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox18P43680 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Sox18P43680 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Gm15565-201ENSMUST00000118890 427 ntBASIC18.34■□□□□ 0.53
Sox18P43680 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.34■□□□□ 0.53
Sox18P43680 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.34■□□□□ 0.53
Sox18P43680 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.34■□□□□ 0.53
Sox18P43680 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sox18P43680 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox18P43680 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms